BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A09SP1|AL426945
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig909 823 0.0
3x_Contig702 722 0.0
>3x_Contig909
Length = 3333
Score = 823 bits (415), Expect = 0.0
Identities = 418/419 (99%)
Strand = Plus / Plus
Query: 1 gatcaaactatgggttgaaacggttccaatcagtgaggaaaatatctccacagtgttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2915 gatcaaactatgggttgaaacggttccaatcagtgaggaaaatatctccacagtgttcaa 2974
Query: 61 aagaatggaaagcggtgatgttcgtttcagattcacactaactgactttgataaacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2975 aagaatggaaagcggtgatgttcgtttcagattcacactaactgactttgataaacagtt 3034
Query: 121 tgaccaattcaaagccaagaaataggcgttgaactgtataaattatatagatggttgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3035 tgaccaattcaaagccaagaaataggcgttgaactgtataaattatatagatggttgaca 3094
Query: 181 cgttgttcatagcttaagtcacttatatatacatactatgacataaacgtcaaaatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3095 cgttgttcatagcttaagtcacttatatatacatactatgacataaacgtcaaaatggaa 3154
Query: 241 acacacataaaatacaacctacaatttatacacattgcaaggaacggctttcataaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3155 acacacataaaatacaacctacaatttatacacattgcaaggaacggctttcataaacac 3214
Query: 301 cagaggacggtaagggtacagtaaagtgcatgaaatgcagtcactgtagccaaggttacc 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3215 cagaggacggtaagggtacagtaaagtgcatgacatgcagtcactgtagccaaggttacc 3274
Query: 361 tttccagtaaccgaaaatttctcgaagaagagcaacaagatcatgggaaatatttgcta 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3275 tttccagtaaccgaaaatttctcgaagaagagcaacaagatcatgggaaatatttgcta 3333
>3x_Contig702
Length = 2831
Score = 722 bits (364), Expect = 0.0
Identities = 378/380 (99%), Gaps = 2/380 (0%)
Strand = Plus / Plus
Query: 585 ttgctgttagtttcgtttactataactcggactttgtgagttcttg-tgagaatgtgttt 643
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 ttgctgttagtttcgtttactataactcggactttgtgagttcttgctgagaatgtgttt 61
Query: 644 ttagaatagacattcttctcttctaaaactagtaaaggtactatcctctctatttgttta 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttagaatagacattcttctcttctaaaactagtaaaggtactatcctctctatttgttta 121
Query: 704 ccttatattgaaagaagaaataataattcatcaagtggcagtcatcgcatatttaagaat 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccttatattgaaagaagaaataataattcatcaagtggcagtcatcgcatatttaagaat 181
Query: 764 gacgacttctaagcgaaatagactgctgaaggaacttctgattgatgataatatacattc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgacttctaagcgaaatagactgctgaaggaacttctgattgatgataatatacattc 241
Query: 824 caaagtacaggctgatttatgggacgctggagatggtggagtacgacggaaacgcaccag 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caaagtacaggctgatttatgggacgctggagatggtggagtacgacggaaacgcaccag 301
Query: 884 agatagacatgacaagtcgtcggatcatataggctataacggtgctgatgattctggggt 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agatagacatgacaagtcgtcggatcatataggctataacggtgctgatgattctggggt 361
Query: 944 gc-accggagaagaataagg 962
|| |||||||||||||||||
Sbjct: 362 gcaaccggagaagaataagg 381
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7998
Number of Sequences: 1807
Number of extensions: 7998
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 2
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)